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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
THCA rs6005113 chr22:27037014 C/T AP1B1 chr22:29723669-29819168:- -0.89 -9.31 4.52E-19 Box Plot
THCA rs6005113 chr22:27037014 C/T APOBEC3F chr22:39436609-39449915:+ -0.65 -7.87 2.4E-14 Box Plot
THCA rs6005113 chr22:27037014 C/T APOL2 chr22:36622249-36636000:- -0.43 -6.74 4.52E-11 Box Plot
THCA rs6005113 chr22:27037014 C/T ARFGAP3 chr22:43192508-43254112:- -0.82 -9.01 4.93E-18 Box Plot
THCA rs6005113 chr22:27037014 C/T ARSA chr22:51061182-51066601:- -0.82 -8.29 1.16E-15 Box Plot
THCA rs6005113 chr22:27037014 C/T ARVCF chr22:19957419-20004331:- -0.63 -6.6 1.09E-10 Box Plot
THCA rs6005113 chr22:27037014 C/T ASCC2 chr22:30184597-30234293:- -0.89 -10.6 1.03E-23 Box Plot
THCA rs6005113 chr22:27037014 C/T ATP6V1E1 chr22:18074902-18111584:- -0.49 -7.41 5.8E-13 Box Plot
THCA rs6005113 chr22:27037014 C/T ATXN10 chr22:46067678-46241187:+ -0.96 -10.71 3.96E-24 Box Plot
THCA rs6005113 chr22:27037014 C/T BCR chr22:23521891-23660224:+ -0.69 -7.86 2.6E-14 Box Plot
THCA rs6005113 chr22:27037014 C/T BRD1 chr22:50166931-50221160:- -0.73 -8.22 1.87E-15 Box Plot
THCA rs6005113 chr22:27037014 C/T C22orf13 chr22:24936406-24951903:- -0.71 -7.89 2.09E-14 Box Plot
THCA rs6005113 chr22:27037014 C/T C22orf23 chr22:38339057-38349676:- -0.68 -7.62 1.37E-13 Box Plot
THCA rs6005113 chr22:27037014 C/T C22orf26 chr22:46445358-46450024:- -0.79 -6.73 4.95E-11 Box Plot
THCA rs6005113 chr22:27037014 C/T C22orf28 chr22:32783562-32808274:- -0.69 -9.11 2.35E-18 Box Plot